Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839173.1_cds_XP_016507206.1_20354
CDS Infomation

[gene=LOC107824912] [db_xref=GeneID:107824912] [protein=F-box-like/WD repeat-containing protein ebi isoform X1] [protein_id=XP_016507206.1] [location=join(183359..183419,189110..189255,189349..189966,190082..190128,190962..191112,191232..191295,194008..194166,194277..194398,195061..195135,195967..196020,196134..196207,197764..197838,198077..198296)] [gbkey=CDS]
Sequence

ATGATCTCTATTACCTCATCGGAGCTGAACTACCTCGTTTTCCGGTACCTTCAAGAATCA
GGGTTTACGCATTCAGCATTTGCTTTAGGATATGAGGCGGGGATTAATAAGAGCACAATA
GATGGAAATTTAGTTCCCCCTGGTGCTCTGGTTACCTTTCTACAAAAGGGAATTCAGTAT
CTTGAATTGGAAGCAAATTTGAGCAATGATGACACAGATATGGATGAAGACTTCCAGTTC
TTACAACCCATTGATCTTATCACGAAGGATGTATATGAGCTGCAAAAAATAATAAAAGAA
AAAAAGGAAAAGCTTCGGCAAGATAAACCTAGGGGAAAAGACAAGGATAACAACGTCCAT
GAGAGGGAGCATGGACGAGAACCTGCTAGAGAAAGGGAGAAGGAAAAACAATTGAAGGAA
AAAGAGCAAGATCGAGATCAGGAGAGAGAGAAGATTGAGAAGGATAAGGAGAGAGAGAAA
AATAAGGACAAAGAAAAACCACGTGAGGATCTCATGGACGCGAAAGCCAATGGAGATAAA
GATGTTGTCAGACATGAGGAGAATGGAAAGACTGCAGGTATTAAATCTCAATATCCTAAT
CTTTATGAACTTTACAGCTGCAAGCCATCCTGGAATATGCATGCATCTGATACATTTGGT
TTGAATTTTGTTAATCACATTATAAAGCATAAAATTCTTAATCACTTGACTTTCTGGAGC
TGCAAAACAGATCCAGAGCCAATGGAGGTTTGCACAAGCTCTACCTCGCTGCCATGTGAA
ATCCCGAGTTCTGATGTAATGGTTTTGGAAGGCCATACATCCGAGGTTTTTGCATGTGCC
TGGAGTCCAGACGGTTCACTTCTTGCATCTGGATCTGGAGATTCTACTGCTAGAATTTGG
ACAATTGGAGATGGTCCTTGTCATTCTCGTATGCAAAATGGGCCTGTAGATGTCATGGTA
TTGAAGCATTTTAAAGGTCGAACAAACGAGAAAAGCAAGGATGTCACAACACTCGAGTGG
AACGGCGAGGGAAACCTACTAGCAACGGGTTCTTATGATGGTCAAGCTAGAATCTGGAAC
CGAGATGGGGAACTGGTAAATACTCTAATCAAACATAAAGGGCCTATCTTCTCGTTGAAG
TGGAATAAGAAAGGTGATTATCTCCTTAGTGGTAGTGTAGACAAAACTGCCATTGTGTGG
GATGTAAAGTCAGGCGAATGGAAGCAGCAGTTTGAATTTCATTCAGCTCCGACTCTTGAT
GTTGATTGGCGAAACAACAATTCCTTTGCAACCTGCTCCACTGATAACATGATTTACGTT
TGTAAAGTTGGAGAGAGTCGGCCTGTCAAAACTTTCTCAGGACATCAGAGTGAAGTCAAT
GCAATCAAGTGGGACCCCTCAGGCTCCTTGTTGGCATCGTGCTCTGATGACACCACGGCT
AAGATATGGAGCGTGAAACAAGATGCCTGCGTGCATGATTTCAAAGAACATGCCAAGGAG
ATCTATACCATCCGATGGAGTCCAACTGGCCCTGGTACGAGCAACCCAAATCAACAATTG
TTGCTGGCCAGTGCCTCTTTTGACTCCACAGTGAAGCTATGGGATGTAGAACTTGGCCGT
CTCCTTCACAGTCTGAATGGCCATAGGGATCCCGTGTATTCTGTTGCATTTAGTCCAAAC
AGCGAGTACTTGGCAACCGGGTCATTGGATAGATGCTTGAACATATGGTCTGTGAAAGAG
GCCAAGATCATAAAAACTTACAGTGGAAATGGTGGAATCTTTGAAGTTTGCTGGAACAAG
GAAGGCAACAAGGTTGCTGCTTGTTTTGCGGACAATGTGGTCTGTGTCTTTGATGTTCGG
ATATAG

Peptide Sequence

PEP ID

XP_016507206.1
PEP Infomation

PREDICTED: F-box-like/WD repeat-containing protein ebi isoform X1 [Nicotiana tabacum]
Sequence

MISITSSELNYLVFRYLQESGFTHSAFALGYEAGINKSTIDGNLVPPGALVTFLQKGIQY
LELEANLSNDDTDMDEDFQFLQPIDLITKDVYELQKIIKEKKEKLRQDKPRGKDKDNNVH
EREHGREPAREREKEKQLKEKEQDRDQEREKIEKDKEREKNKDKEKPREDLMDAKANGDK
DVVRHEENGKTAGIKSQYPNLYELYSCKPSWNMHASDTFGLNFVNHIIKHKILNHLTFWS
CKTDPEPMEVCTSSTSLPCEIPSSDVMVLEGHTSEVFACAWSPDGSLLASGSGDSTARIW
TIGDGPCHSRMQNGPVDVMVLKHFKGRTNEKSKDVTTLEWNGEGNLLATGSYDGQARIWN
RDGELVNTLIKHKGPIFSLKWNKKGDYLLSGSVDKTAIVWDVKSGEWKQQFEFHSAPTLD
VDWRNNNSFATCSTDNMIYVCKVGESRPVKTFSGHQSEVNAIKWDPSGSLLASCSDDTTA
KIWSVKQDACVHDFKEHAKEIYTIRWSPTGPGTSNPNQQLLLASASFDSTVKLWDVELGR
LLHSLNGHRDPVYSVAFSPNSEYLATGSLDRCLNIWSVKEAKIIKTYSGNGGIFEVCWNK
EGNKVAACFADNVVCVFDVRI

Transcript Sequence

Gene sequence data has not been registered.